2024-07-17 : 18073 3D structures containing nucleic acids | RNAEQ v3.344all
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Welcome to NAKB

The Nucleic Acid Knowledgebase (NAKB), portal for 3D structural information about Nucleic Acids, is successor to the Nucleic Acid Database (NDB), as described in:

  • Lawson CL, Berman HM, Vallat B, Chen L, Zirbel C (2024) The Nucleic Acid Knowledgebase: a new portal for 3D structural information about nucleic acids. Nucleic Acids Research 52, D245. DOI
  • Berman HM, Lawson CL, Schneider B (2022) Developing Community Resources for Nucleic Acid Structures. Life 12, 540. DOI
  • November 2023 online lecture (YouTube) describing NAKB to the CASP RNA special interest group.

NAKB provides search, report, statistics, atlas and visualization pages for all nucleic-acid containing experimentally determined 3D structures held by NDB and by the Protein Data Bank (PDB), including all major methods: X-ray, NMR, and Electron Microscopy. For each structure, links are provided to external resources that annotate and analyze nucleic acid structures and their complexes.